A B C D E F G H I K L M N O P R S T U V

S

save(String) - Method in class com.bayesia.api.APIInference

Saves the created network and its associated junction tree (if the inference type is EXACT_INFERENCE) into the file specified by the given path.

save(OutputStream) - Method in class com.bayesia.api.APIInference

Saves the created network and its associated junction tree (if the inference type is EXACT_INFERENCE) into the specified OutputStream.

save(String) - Method in class com.bayesia.api.APILearning

Saves the created network to the file specified by the given path.

save(OutputStream) - Method in class com.bayesia.api.APILearning

Saves the created network into the specified OutputStream.

save(String) - Method in class com.bayesia.api.APIModeling

Saves the created network to the file specified by the given path.

save(OutputStream) - Method in class com.bayesia.api.APIModeling

Saves the created network into the specified OutputStream.

save(OutputStream) - Method in interface com.bayesia.api.ResizableIcon

Save the current image into the given output stream.

setAllArcsDeleted(boolean) - Method in class com.bayesia.api.learning.settings.EQSettings

setAllArcsDeleted(boolean) - Method in class com.bayesia.api.learning.settings.GreedySettings

setAllArcsDeleted(boolean) - Method in class com.bayesia.api.learning.settings.TabooSettings

setArcComment(String, String, String) - Method in class com.bayesia.api.APIModeling

Set the comment associated to the arc between the nodes named nodeName1 and nodeName2.

setBackgroundImage(ResizableIcon) - Method in class com.bayesia.api.APIModeling

Sets the image associated to the network.

setClassFunctionNodeBooleanFormatter(String, BooleanFormatter) - Method in class com.bayesia.api.APIModeling

Sets the Boolean formatter to each not excluded function node of the given class.

setClassFunctionNodeNumberFormatter(String, NumberFormatter) - Method in class com.bayesia.api.APIModeling

Sets the Number formatter to each not excluded function node of the given class.

setClassFunctionNodeStringFormatter(String, StringFormatter) - Method in class com.bayesia.api.APIModeling

Sets the String formatter to each not excluded function node of the given class.

setClassNodeColor(String, Color) - Method in class com.bayesia.api.APIModeling

Sets the color for each node of the given class.

setClassNodeCost(String, Double) - Method in class com.bayesia.api.APIModeling

Sets a cost to each not excluded node of the given class.

setClassNodeExcluded(String, boolean) - Method in class com.bayesia.api.APIModeling

Indicates if each node of the the given class will be excluded or not from the structural learning.

setClassNodeImage(String, ResizableIcon) - Method in class com.bayesia.api.APIModeling

Sets an image to each node of the given class.

setClassNodeStateVirtualNumber(String, Integer) - Method in class com.bayesia.api.APIModeling

Sets the state virtual number to each not excluded node of the given class.

setClassNodeStateVirtualNumber(String, Double) - Method in class com.bayesia.api.APIModeling

Sets the structural coefficient to each not excluded node of the given class.

setClassNodeTemporalIndex(String, Integer) - Method in class com.bayesia.api.APIModeling

Sets a temporal index to each not excluded node of the given class.

setComment(String) - Method in class com.bayesia.api.APIModeling

Sets the comment associated to the network.

setConditionalProbabilityTable(String, double[]) - Method in class com.bayesia.api.APIModeling

Sets the conditional probability table for the specified node.

setDecisionTable(String, double[]) - Method in class com.bayesia.api.APIModeling

Sets the decision table for the specified node.

setDigits(int) - Method in class com.bayesia.api.format.NumberFormatter

Sets the number of decimals to display.

setFormula(String, String, boolean, int, int, boolean, long, boolean) - Method in class com.bayesia.api.APIModeling

Sets the formula describing the conditional probability table for the given node.

setFunctionNodeBooleanFormatter(String, BooleanFormatter) - Method in class com.bayesia.api.APIModeling

Sets the Boolean formatter of the function node.

setFunctionNodeNumberFormatter(String, NumberFormatter) - Method in class com.bayesia.api.APIModeling

Sets the Number formatter of the function node.

setFunctionNodeStringFormatter(String, StringFormatter) - Method in class com.bayesia.api.APIModeling

Sets the String formatter of the function node.

setGroupingUsed(boolean) - Method in class com.bayesia.api.format.NumberFormatter

Sets the grouping of the numbers (by 3) to the given value

setInferenceType(int) - Method in class com.bayesia.api.APIInference

Sets the type of inference to use.

setLetterCase(APIUtils.LETTER_CASE) - Method in class com.bayesia.api.format.StringFormatter

Sets the letter case used to format a value.

setLikelihood(String, String, double) - Method in class com.bayesia.api.APIInference

Sets the likelihood for a value of a node (soft evidence).

setLikelihood(String, short, double) - Method in class com.bayesia.api.APIInference

Sets the likelihood for a value of a node (soft evidence).

setLikelihoodFromMean(String, double, boolean) - Method in class com.bayesia.api.APIInference

Computes the likelihood for all the values of a node in order to have its mean equal to the specified one.

setLikelihoodFromProbabilities(String, double[]) - Method in class com.bayesia.api.APIInference

Computes the likelihood for all the values of a node in order to have its probabilities equal to the specified ones.

setLikelihoods(String, double[]) - Method in class com.bayesia.api.APIInference

Sets the likelihoods for all the values of a node.

setListLength(int) - Method in class com.bayesia.api.learning.settings.TabooOrderSettings

setListLength(int) - Method in class com.bayesia.api.learning.settings.TabooSettings

setMarkovBlanketRestrictionBlocked(boolean) - Method in class com.bayesia.api.learning.settings.SupervisedLearningSettings

setMarkovBlanketRestrictionEnabled(boolean) - Method in class com.bayesia.api.learning.settings.SupervisedLearningSettings

setMarkovBlanketRestrictionFixedSeed(boolean) - Method in class com.bayesia.api.learning.settings.SupervisedLearningSettings

setMarkovBlanketRestrictionFrequencyThreshold(double) - Method in class com.bayesia.api.learning.settings.SupervisedLearningSettings

setMarkovBlanketRestrictionSeed(long) - Method in class com.bayesia.api.learning.settings.SupervisedLearningSettings

setMarkovBlanketRestrictionTestCount(int) - Method in class com.bayesia.api.learning.settings.SupervisedLearningSettings

setMarkovBlanketRestrictionUsed(boolean) - Method in class com.bayesia.api.learning.settings.SupervisedLearningSettings

setMaxChildNumber(int) - Method in class com.bayesia.api.learning.settings.TabooSettings

setMaxParentNumber(int) - Method in class com.bayesia.api.learning.settings.TabooSettings

setNodeColor(String, Color) - Method in class com.bayesia.api.APIModeling

Sets the color of the node.

setNodeComment(String, String) - Method in class com.bayesia.api.APIModeling

Set the comment associated to the specified node.

setNodeCost(String, Double) - Method in class com.bayesia.api.APIModeling

Sets the cost of the node to the given double value.

setNodeExcluded(String, boolean) - Method in class com.bayesia.api.APIModeling

Indicates if the given node will be excluded or not from the structural learning.

setNodeFilteredState(String, short) - Method in class com.bayesia.api.APIModeling

Sets the node's filtered state.

setNodeImage(String, ResizableIcon) - Method in class com.bayesia.api.APIModeling

Sets an image to the node.

setNodeLongName(String, String) - Method in class com.bayesia.api.APIModeling

Set the long name associated to the specified node.

setNodePosition(String, double, double) - Method in class com.bayesia.api.APIModeling

Sets the position of the center of the node in double coordinates.

setNodeStateVirtualNumber(String, Integer) - Method in class com.bayesia.api.APIModeling

Sets the state virtual number of the node to the given Integer value.

setNodeStructuralCoefficient(String, Double) - Method in class com.bayesia.api.APIModeling

Sets the structural coefficient used for learning to the given Double value.

setNodeTemporalIndex(String, Integer) - Method in class com.bayesia.api.APIModeling

Sets the temporal index of the node to the given value.

setObservationValidityEnabled(boolean) - Method in class com.bayesia.api.APIInference

Sets the observation validity enabled or not.

setObservedMean(String, double, boolean) - Method in class com.bayesia.api.APIInference

Computes the likelihood for all the values of a node in order to have its mean equal to the specified one.

setObservedProbabilities(String, double[]) - Method in class com.bayesia.api.APIInference

Computes the likelihood for all the values of a node in order to have its probabilities equal to the specified ones.

setOutgoingArcFixed(boolean) - Method in class com.bayesia.api.learning.settings.MarkovBlanketSettings

setPercent(boolean) - Method in class com.bayesia.api.format.NumberFormatter

Sets the percent format to the given value

setPrefix(String) - Method in class com.bayesia.api.format.NumberFormatter

Sets the prefix of the formatted Number.

setReplacementValueFalse(String) - Method in class com.bayesia.api.format.BooleanFormatter

Sets the replacement value for the "false" state.

setReplacementValueTrue(String) - Method in class com.bayesia.api.format.BooleanFormatter

Sets the replacement value for the "true" state.

setSampleSize(int) - Method in class com.bayesia.api.APIInference

Sets the sample size used by approximate inference.

setScientificNotationUsed(boolean) - Method in class com.bayesia.api.format.NumberFormatter

Sets the scientific notation mode to the given value

setScore(int) - Method in class com.bayesia.api.learning.settings.MaximumSpanningTreeSettings

setSmoothedProbabilityEstimation(double) - Method in class com.bayesia.api.learning.settings.AbstractLearningSettings

Sets the weight of the non informative prior, i.e. the virtual case(s) spread uniformly across the joint probability distribution.

setStateLongNameAt(String, String, int) - Method in class com.bayesia.api.APIModeling

Sets the long name of the given state for the given node.

setStateLongNames(String, String[]) - Method in class com.bayesia.api.APIModeling

Sets the long names for the states of the specified node.

setStateValueAt(String, Double, int) - Method in class com.bayesia.api.APIModeling

Sets a value to the given state of the given node.

setStateValues(String, Double[]) - Method in class com.bayesia.api.APIModeling

Sets the values for each state of the given node.

setStructuralCoefficient(Double) - Method in class com.bayesia.api.APIModeling

Sets the global structural coefficient of the network for learning.

setStructuralCoefficient(double) - Method in class com.bayesia.api.learning.settings.AbstractLearningSettings

Sets the weight associated to the structural part used in the Minimum Description Length score.

setSuffix(String) - Method in class com.bayesia.api.format.NumberFormatter

Sets the suffix of the formatted Number.

setTargetNode(String, short) - Method in class com.bayesia.api.APIInference

Set the given node as target node with the given target state.

setTargetNodeName(String) - Method in class com.bayesia.api.learning.settings.SupervisedLearningSettings

setTime(int) - Method in class com.bayesia.api.APIInference

Performs a temporal simulation from the current time to the specified time.

setTimeUsed(boolean) - Method in class com.bayesia.api.APIModeling

Specifies we want to use the time counter in the network.

setTrailingZerosTrimmed(boolean) - Method in class com.bayesia.api.format.NumberFormatter

Sets the trim mode for the trailing zeros to the given value

setUnfixedArcsDeleted(boolean) - Method in class com.bayesia.api.learning.settings.EQSettings

setUnfixedArcsDeleted(boolean) - Method in class com.bayesia.api.learning.settings.GreedySettings

setUnfixedArcsDeleted(boolean) - Method in class com.bayesia.api.learning.settings.TabooSettings

setUtilityTable(String, double[]) - Method in class com.bayesia.api.APIModeling

Set the utility table for the specified decision node.

setVerbose(boolean) - Method in class com.bayesia.api.learning.settings.AbstractLearningSettings

Tells the learning algorithm to print output information to the standard output stream System.out during learning.

size() - Method in interface com.bayesia.api.Database

Return the size of the database, i.e. the number of examples in the database.

SopLEQSettings - Class in com.bayesia.api.learning.settings

Learning settings for the SopLEQ learning algorithm.

sortNodeNames(String[], APIUtils.NODE_SORTING_METHOD, boolean) - Method in class com.bayesia.api.APIModeling

Sort the given array containing the name of the nodes in the network sorted according to the APIUtils.NODE_SORTING_METHOD

StringFormatter - Class in com.bayesia.api.format

The class StringFormatter is used to format the computed FunctionValue of a function node, when the value is a String.

StringFormatter(APIUtils.LETTER_CASE) - Constructor for class com.bayesia.api.format.StringFormatter

Creates an instance with two specified letter case.

SupervisedLearningSettings - Class in com.bayesia.api.learning.settings

A B C D E F G H I K L M N O P R S T U V